This book constitutes the proceedings of the Third InternationalConference on Algorithms for Computational Biology, AlCoB 2016, held inTrujillo, Spain, in June 2016.The 13 full papers presented in this volume were carefully reviewed andselected from 23 submissions.

The Trees in the Peaks.- Relating Bisimulations with Attractors in Boolean Network Models.- Neural Network Simulation of Feeding Adaptations of Daphnia.- Generating the Logicome of a Biological Network.- Counting, Generating and Sampling Tree Alignments.- A New Multi-Objective Approach for Molecular Docking Based on RMSD and Binding Energy.- Gibbs/MCMC Sampling for Multiple RNA Interaction withSub-optimal Solutions.- Accumulated Coalescence Rank and Excess Gene Count for Species Tree Inference.- Bootstrapping Algorithms for Gene Duplication and Speciation Events.- Robustness of the Parsimonious Reconciliation Method in Cophylogeny.- Sorting with Forbidden Intermediates.- Evaluation and Improvement of Fast Algorithms for Exact Matching on Genome Sequences.- Identification of Variant Compositions in Related Strains without Reference.- New Error Tolerant Method for Search of Long Repeats in DNA Sequences.

GPSR Compliance The European Union's (EU) General Product Safety Regulation (GPSR) is a set of rules that requires consumer products to be safe and our obligations to ensure this. If you have any concerns about our products you can contact us on ProductSafety@springernature.com. In case Publisher is established outside the EU, the EU authorized representative is: Springer Nature Customer Service Center GmbH Europaplatz 3 69115 Heidelberg, Germany ProductSafety@springernature.com